Gene: AT1G08070
     

Gene description


TAIR ID: AT1G08070

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -2.86

General responsiveness: -3.55

GO biological process


chloroplast RNA modification, mRNA processing, chloroplast RNA processing


GO cellular component


chloroplast


GO molecular function


protein binding, zinc ion binding, endonuclease activity, RNA binding


Protein domain


PfamPF14432, DYW family of nucleic acid deaminases
PfamPF13041, PPR repeat family
PfamPF12854, PPR repeat
PfamPF01535, PPR repeat

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.044.73E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.966.86E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.634.21E-04






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