gene detail

Gene description

TAIR ID: AT1G06450

Short description: Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Pathogen responsiveness: -2.60

General responsiveness: -0.96

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

RNA modification, transcription, DNA-templated, regulation of transcription

GO cellular component

nucleus

GO molecular function

ribonuclease activity, metal ion binding, RNA binding

Protein domain

Pfam	PF04857, CAF1 family ribonuclease

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03018: RNA degradation

Transcriptional regulation

Regulator:
AT5G56110

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view
GSE56094_WT_HRPA- view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.73	3.58E-02