Gene: AT1G05600
     

Gene description


TAIR ID: AT1G05600

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -1.56

General responsiveness: -1.87

Orthologous


Rice:

OS01G0913800  

Maize:

GRMZM2G170941  

Wheat: No orthologous gene

GO biological process


RNA modification


GO cellular component


mitochondrion, intracellular membrane-bounded organelle


GO molecular function


endonuclease activity, RNA binding


Protein domain


PfamPF12854, PPR repeat
PfamPF01535, PPR repeat
PfamPF13041, PPR repeat family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G16110, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.682.54E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.559.08E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.844.36E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.014.81E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.578.55E-11






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