gene detail

Gene description

TAIR ID: AT1G04050

Short description: homolog of SU(var)3-9 1

Pathogen responsiveness: -2.80

General responsiveness: -4.07

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

histone lysine methylation, gene silencing by RNA

GO cellular component

nucleus, chromosome, nucleolus

GO molecular function

histone-lysine N-methyltransferase activity, protein binding, identical protein binding, zinc ion binding

Protein domain

Pfam	PF00856, SET domain
Pfam	PF05033, Pre-SET motif
Pfam	PF10440, Ubiquitin-binding WIYLD domain
SMART	SM00317, SET
SMART	SM00468, PreSET

Metabolic pathway

PWY-6424: 26,27-dehydrozymosterol metabolism

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.76	2.19E-02