Gene: AT1G02580
     


Gene description


TAIR ID: AT1G02580

Short description: SET domain-containing protein

Pathogen responsiveness: -1.64

General responsiveness: -3.81

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, negative regulation of transcription, regulation of endosperm development, response to absence of light, regulation of gene expression by genetic imprinting, seed morphogenesis


GO cellular component


nucleus, PcG protein complex


GO molecular function


protein binding, histone-lysine N-methyltransferase activity, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00856, SET domain
SMARTSM00317, SET
SMARTSM01114, CXC

Transcriptional regulation


Regulator:
AT5G13790, AT4G31800

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.422.01E-07
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d3.131.88E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.003.34E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h1.532.45E-02
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h1.751.02E-02






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