gene detail

Gene description

TAIR ID: AT1G01860

Short description: Ribosomal RNA adenine dimethylase family protein

Pathogen responsiveness: -1.00

General responsiveness: -1.71

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G174669

Wheat: No orthologous gene

GO biological process

mRNA methylation, response to cold

GO cellular component

cytoplasm, chloroplast

GO molecular function

rRNA (adenine-N6,N6-)-dimethyltransferase activity, mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity, RNA binding

Protein domain

Pfam	PF00398, Ribosomal RNA adenine dimethylase
SMART	SM00650, rADc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.56	1.79E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.74	7.86E-15
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.66	1.99E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.58	2.37E-14
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.78	1.34E-12
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.53	2.08E-03