Email: shiwy@cau.edu.cn

Position: Associate Professor

Tel.: +86-(0)10-62734412

Addr.: College of Biological Sciences, China Agricultural University, Yuanmingyuan West Rd., Haidian District, Beijing, China

Degree: P.H.D.

Country: China

Research Interests:

Computational biology, Metagenomic algorithm optimization, Genomic big data

Educations:

09/2011-07/2017 College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China.

Computational Genomics Lab, Beijing Institutes of Life Science, Chinese Academy of Sciences, Beijing, China. Ph.D., in Genetics.

09/2006-07/2010 College of Science, Minzu University of China (Central University for Nationalities), Beijing, China. B.S., in Statistics.

Experiences:

10/2022 to Present College of Biological Sciences, China Agricultural University, Beijing, China. Associate professor.

07/2017 to 09/2022 The Center for Microbial Resource and Big Data, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China. Assistant professor.

Teaching courses

Protein Bioinformatics

Selective Publications

Liu D^, Zhang Y, Fan G, et al. IPGA: A handy integrated prokaryotes genome and pan-genome analysis web service. iMeta, 2022, 1(4): e55. (Co-corresponding author)

Shi W^, Fan G, Shen Z, et al. gcCov: Linked open data for global coronavirus studies. Mlife, 2022, 1(1): 92-95.

Shi W^, Sun Q^, Fan G, et al. gcType: a high-quality type strain genome database for microbial phylogenetic and functional research. Nucleic Acids Research, 2021, 49(D1): D694-D705.

Shi W^, Qi H^, Sun Q, et al. gcMeta: a Global Catalogue of Metagenomics platform to support the archiving, standardization and analysis of microbiome data. Nucleic acids research, 2019, 47(D1): D637-D648.

Wang J^, Zheng J^, Shi W^, et al. Dysbiosis of maternal and neonatal microbiota associated with gestational diabetes mellitus. Gut, 2018, 67(9): 1614-1625.

Shi W^, Ji P^ & Zhao F*. The combination of direct and paired link graphs boosts repetitive genome assembly. Nucleic Acids Research, 2017, 45 (6): e43.