Welcome to InterSPPI-AraPathogen2.0!

AraPathogen predicts protein-protein interactions (PPIs) between Arabidopsis thaliana and pathogens based on sequence and Arabidopsis thaliana intra-species PPI network (i.e., AraNet) information.

Pathogen effector sequences

Arabidopsis thaliana sequences

or Arabidopsis thaliana proteome.


Specificity:
0.99
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访问次数:6743 访问国家数:54 处理任务数:925


Citation:
Lei C, Zhou K, Zheng J, et al. AraPathogen2.0: An Improved Prediction of Plant-Pathogen Protein-Protein Interactions Empowered by the Natural Language Processing Technique. J. Proteome Res. 2024, 23, 494−499. doi:10.1021/acs.jproteome.3c00364

Yang S, Li H, He H, Zhou Y, Zhang Z. Critical assessment and performance improvement of plant-pathogen protein-protein interaction prediction methods. Brief Bioinform. 2019;20(1):274-287. doi:10.1093/bib/bbx123


News:
AraPathogen2.0 is released