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File	Description
High quality interactions	High quality protein interactions, containing a total of 11858 protein interactions
All Arabidopsis PPIs	A total of 49398 pairs of PPIs were obtained after collection and filtration
Sequences of Arabidopsis thaliana	A total of 28361 sequences of Arabidopsis were obtained after collection and screening
All PPIs in Oryza sativa	A total of 611 pairs of PPIs were obtained after collection and screening
Sequences of Oryza sativa	A total of 4421 sequences of Oryza sativa were obtained after collection and screening
Task1 dataset	The dataset of Task1, including positive and negative samples
Task4 dataset	The dataset of Task4, including positive and negative samples
C1 subset	The training set of the model in task2,3 includes positive and negative samples
C2 subset	Task2's independent set of tests, including positive and negative samples
C3 subset	Task3's independent set of tests, including positive and negative samples
Network of GO2vec	GO networks, including GO-GO terms and GO annotations of Arabidopsis and Oryza sativa proteins
Network of Domain2vec	The network of Domain2vec, including DDI and domain annotations of Arabidopsis and Oryza sativa proteins