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Wenyu Shi
Associate Professor
shiwy@cau.edu.cn+86-(0)10-62734412College of Biological Sciences, China Agricultural University, No.2, Yuanmingyuan West Rd., Haidian district, 100193, Beijing, China
View Publications → Research Interests
Computational biology, Metagenomic algorithm optimization, Genomic big data
Education
- 09/2011-07/2017 College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China. Computational Genomics Lab, Beijing Institutes of Life Science, Chinese Academy of Sciences, Beijing, China.Ph.D., in Genetics.
- 09/2006-07/2010 College of Science, Minzu University of China(Central University for Nationalities), Beijing, China.B.S., in Statistics
Experience
- 10/2022 to Present College of Biological Sciences, China Agricultural University, Beijing, China. Associate professor.
- 07/2017 to 09/2022 The Center for Microbial Resource and Big Data, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China. Assistant professor.
Teaching
Protein Bioinformatics
Selected Publications
- Liu D, Zhang Y, Fan G, et al. IPGA: A handy integrated prokaryotes genome and pan-genome analysis web service. iMeta, 2022, 1(4): e55.
- Shi W, Fan G, Shen Z, et al. gcCov: Linked open data for global coronavirus studies. Mlife, 2022, 1(1): 92-95.
- Shi W, Sun Q, Fan G, et al. gcType: a high-quality type strain genome database for microbial phylogenetic and functional research. Nucleic Acids Research, 2021, 49(D1): D694-D705.
- Shi W, Qi H, Sun Q, et al. gcMeta: a Global Catalogue of Metagenomics platform to support the archiving, standardization and analysis of microbiome data. Nucleic acids research, 2019, 47(D1): D637-D648.
- Wang J, Zheng J, Shi W, et al. Dysbiosis of maternal and neonatal microbiota associated with gestational diabetes mellitus. Gut, 2018, 67(9): 1614-1625.
- Shi W, Ji P & Zhao F. The combination of direct and paired link graphs boosts repetitive genome assembly. Nucleic Acids Research, 2017, 45(6): e43.