Input parameters:

  Query = sp_Q6P773_TAF1C_RAT (Len=842)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (sp_Q6P773_TAF1C_RAT, Len=842):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDFPSTLRPSLFMAGPLGMTDGPDLSFMCSWRDALTLPGAQPQNCRDQTSSFAKNLLWEPSTPGPLPLVPPGPDPWDPGL 80  
WD40-rpts                                                                                      

Query       81 AAQDFLFRGGHYYQYQSRVVLDVTEQLSRFLWDHGDIAFAPLGKLMLENFRLEGNRGYSKKVTIVSVKRLLQDLGGHQPW 160 
WD40-rpts                                                                                      

Query      161 GCPWASLSRRLRRFSILGGPVLSRSVSLLMGRLLHEELATRWEQLLMDEAFTGGALAWLPGRTARAGQLVYPSGGALDKL 240 
WD40-rpts                                                                                      

Query      241 YFQEVSVNSGGNPRVLEDPGHIQLRGPVRQVVTSTVQGETLLAVRSDYHCAVWKIDKQEPPAPLQVLQVEKGATGISLSP 320 
WD40-rpts                                                                                      

Query      321 HLSGELAICSRSGTVCLWTPQDGLQTIYKDPETLAFRDPSPWRWADFTAHPRVLTVGDRTGVKMVDIQGPPGCGLLLFCA 400 
WD40-rpts                                                                                      

Query      401 GAEAACQKGERVLLAQYLGQPGPASTSLHLICTQFSIYLMDERLPLVPMLKWDHGLPSAPLLARLLPPASPGYPRPLLLG 480 
WD40-rpts                                                                                      

Query      481 GQGGQVQLLHIAGEGTSIPQLAGPPQSLPSITDSLSAFPLLEPKRQQQLQERLEAPVIGLAAAPPCASAPGLLLFQLSAA 560 
WD40-rpts                                                                                      

Query      561 GDVFYQHLRIQQTSSLREPDHPAPERPASRAAAPPVDQGSTPSWTSRASARCSRWLEALMELSPTNPVWAAPTFSHRRFL 640 
WD40-rpts                                                                                      

Query      641 GHMERQKSQETLAQKLQAAMAKGQLLRPGDLGTLPKAEPPPAPQCSQQDELTERLTKAWEGQAAAWWKRHQDQTSGSQRQ 720 
WD40-rpts                                                                                      

Query      721 SKRPKRRTQLSSTFSSFTSYMDSPDASSAPHSQDLSNSEACPQPPRTPPSQELTQELWAQGVQHERRQTLRDYMAKLPLQ 800 
WD40-rpts                                                                                      

Query      801 DNPGPVATPPSQTSSRQTRSFRQQTPVLSGSHPPRKKPRMGF 842 
WD40-rpts                                                

No WD40-repeats found in QUERY=sp_Q6P773_TAF1C_RAT (Len=842)!