WDRR: WD40 Repeat Recognition
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JobID: RWXCI1477642178    Submitted: 2016-10-28 16:09:38

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Job status:  [Done] Total run time: 261610038 seconds.    [Download result as txt]    [Query sequence in FASTA]
Input parameters:
  Query = bmgn009968 (Len=632)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (bmgn009968, Len=632):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAQLITVRLNKSDHQPLGFRLQGGKDFGTPLVVQKVNGGSAAERAGLQAGDALIRVNNTDVFTLRHQDAQDTIRAAGANL 80  
WD40-rpts                                                                                      

Query       81 ELTVQRGGGTWRPSVTPTGSLPRPGSRPLGGTPTPVTNTSLKANPQPSRNFGSGHNNVAKPFGYMNGNDTVKSVVNKQYN 160 
WD40-rpts                                                                                      

Query      161 TPVNIYSDKTIAETLSAQTEVLAGGVLGVNFKKNEKTYDAEKSAVFKVLQEEQNDPEPEVSTPTTGSVPPVSGLRHVQAP 240 
WD40-rpts                                                                                      

Query      241 VTRPDAPVNNTGGLPPGQNICEECERLITGVFVRIKDKNLHVECFKCSTCGSSLKNQGYYNINGKLYCDIHAKLVARQNP 320 
WD40-rpts                                                                                      

Query      321 PAPNLDPVTVPPGGRVPTNTYSTPLPPLSTNNYSNGSSSLFSPSSNLSGPKPFGSSVGSAYSPSLSPRSAPLSPARPLTA 400 
WD40-rpts                                                                                      

Query      401 PAPPPAAPFAPKRPVSVFKGSSVGAATRGKTFGVSSAPKRGRGILNKPALPGSRVPLCASCNGNIRGPFITALGRIWCPE 480 
WD40-rpts                                                                                      

Query      481 HFICVNATCRRPLQDIGFVEENGQLYCEFCFEQYIAPACDKCHAKIKGDCLNAIGKHFHPECFNCVYCGKLFGNNPFFLE 560 
WD40-rpts                                                                                      

Query      561 DGLPYCEADWNELFTTKCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLEGQSFFAKGGRPFCKTHAR 632 
WD40-rpts                                                                              



No WD40-repeats found in QUERY=bmgn009968 (Len=632)!

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