Input parameters:

  Query = AN1056_373aa (Len=373)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AN1056_373aa, Len=373):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAVSSHRDDFFQTTSALDEQRRKEAKSINTNGSPIRLQSKILAVKPDPFDLGSVFVAQSGGTVRKIVLATGETASIFKGP 80  
WD40-rpts                                 (_________________WD 1_________________)   (_________

Query       81 TAPITSLCFSPNGRILFAGCWDKTIWSWDVNSTQRKLQYEGHTDFVRSVVTTRVNGQDLLVSGGADAQILVFDISSGQRL 160 
WD40-rpts      ________WD 2________________)   (__________________WD 3_________________)   (___

Query      161 HVWKGHAKGVQDLLIDPLTLDDNSTEQIVFSAGSDREIRQFDLSKGSQDLTGTEALLAHDTNVYKLHFDQDGDLWTASAD 240 
WD40-rpts      _________________WD 4____________________)           (______________WD 5________

Query      241 KTTKCLIREDGWKANLTLTHPDYVKDVVVDERGGWVITACRDEEIRVWNRSTGQLYHTFSGHYEEVTGLVLLGTMLVSVS 320 
WD40-rpts      ______)   (_________________WD 6________________)   (________________WD 7_______

Query      321 IDATIRQWSLKPDDLRNAVAQATEHPTDEPSTNPESMLTEEEERELAELLEDD 373 
WD40-rpts      ________)                                            

7 WD40-repeats found in QUERY=AN1056_373aa (Len=373):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    28-67       4.13  285.40  0.00884        7.5%     37.12
  WD 2:  Seg  8    71-109     10.22  536.63  3.6e-06       42.5%     57.57
  WD 3:  Seg 12   113-153      7.97  443.84  6.5e-05       35.0%     54.79
  WD 4:  Seg 16   157-202      7.83  438.06  7.8e-05       27.5%     55.74
  WD 5:  Seg 20   214-247      6.80  395.45  0.00029       27.5%     47.39
  WD 6:  Seg 23   251-289      8.89  481.76  2.0e-05       22.5%     57.69
  WD 7:  Seg 27   293-329      7.86  439.19  7.5e-05       40.0%     54.03

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   28-67     INTNGSPIRLQSKILAVKPDPF-------DL--GSVFVAQSGGTVRKIV
   WD 2   71-109    -GETASIFKGPTAPITSLCFSP-------NG--RILFAGCWDKTIWSWD
   WD 3  113-153    -TQRKLQYEGHTDFVRSVVTTR-------VNGQDLLVSGGADAQILVFD
   WD 4  157-202    -GQRLHVWKGHAKGVQDLLIDPLTLDDNSTE--QIVFSAGSDREIRQFD
   WD 5  214-247    -----EALLAHDTNVYKLHFDQ-------DG--D-LWTASADKTTKCLI
   WD 6  251-289    -GWKANLTLTHPDYVKDVVVDE-------RG--GWVITACRDEEIRVWN
   WD 7  293-329    -GQLYHTFSGHYEEVTGLVLL---------G--TMLVSVSIDATIRQWS

   WD40 Template    TGECLRTLSGHTSGVTSVSFSP-------DG--KRLVSGSEDGTIKVWD