WDRR: WD40 Repeat Recognition
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JobID: L2R7H1501674242    Submitted: 2017-08-02 19:44:02

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Job status:  [Done] Total run time: 237577220 seconds.    [Download result as txt]    [Query sequence in FASTA]
Input parameters:
  Query = At3g08750 (Len=369)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (At3g08750, Len=369):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASSKCLLLPSLPFELIEEILYKIPAESLIRFKSTCKKWYNLITEKRFMYNHLDHYSPERFIRTYDQQIIDPVTEILSDA 80  
WD40-rpts                                                                                      

Query       81 LIPDEFRDLYPIYSMVHCDGLMLCTCRKWDNSLAVWNPVLREIKWIKPSVCYLHTDYVGIGYDDNVSRDNYKILKLLGRL 160 
WD40-rpts                                                                                      

Query      161 PKDDDSDPNCEIYEFKSDSWKTLVAKFDWDIDIRCNNGVSVKGKMYWIAKKKEDFTIIRFDFSTETFKEICVCPYTLVTR 240 
WD40-rpts                                                                                      

Query      241 LGCFDGDRLSLLLQGEESQGIEVWMTNKLSDKVVSFSQYFNVTTPDLPALHLQSCMACPGYSIGKRRNIRVWCEGSVDVD 320 
WD40-rpts                                                                                      

Query      321 DKSYVIITFYEIDEGGVIKQIETASYGQFEYDDPFICCYVYVPSLIPIQ 369 
WD40-rpts                                                       



No WD40-repeats found in QUERY=At3g08750 (Len=369)!

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