Input parameters:
Query = PF3D7_1231900 (Len=1086)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (PF3D7_1231900, Len=1086):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MPDTKYENLLQYDLKIYRNDILEKEKKKNDLRNILFFPSLFWFNGQFCPPIPVVKYYSNLCAFKVKDYVTCSIHKFSVII 80
WD40-rpts
Query 81 RRIVKNEIVHVNMFNEKKVLSCVFYINIDYILKLSNIINKYMLLDFVPLTTCLVEKENELIKYTYKKNISLSYKLFCYNE 160
WD40-rpts
Query 161 KNEIHLFDVEKNKSLLSFSEKNQITCLTFNFLYISKKNSLYNKLFNDIYDENKIKIVDIDNIDKQIVTKNMYCFELSQDK 240
WD40-rpts
Query 241 INNTYNTCKDNEKHLKIFKNLFYLLIYGDDQGNVYFFVPQKNVKIKKKLRNEKINLIETNVKEYFKVQNINDLYHNIKNN 320
WD40-rpts
Query 321 HYIFVAYKECIQVVQFYFFEIYFVINFVHEKLYSMTTKFNNLGQNYLSFSTKNYVKIYNINEMKEINCINNNIIQKRDEN 400
WD40-rpts
Query 401 NEKENIILHEIDKSSENQEVEEDQEEEKKKKKHCLIACPVQKLHEQTGEKNINENYKEIICDDMEYKKYENNENMEEQNK 480
WD40-rpts
Query 481 DDSLIYTSNKNHKNDNNKNISDKKDLKYYTCIHFDSADNIYISSDKGIINVYNLNEKRIIKSFHINCKIIFYLFFFILNN 560
WD40-rpts
Query 561 KEYIYIYDSEKFYCLYVIDEKKNVYKIFTLSLWIYHIICFDNNIIFSLGNENIYNLQLKKYNNNKILNSIYSNNINICIF 640
WD40-rpts
Query 641 LINHPQLPIIAFINKKSVFGFFYLTKVQKKRPNQEKNIIIPNIRENQHIISICWFGKPKNIIKNKDILFDYDNVNDIIEK 720
WD40-rpts
Query 721 TNNSNDVQANSHCVYESVSLNNNHIDIIENNVTKENKKKKRKKMNMMKMEGLKSDMNNNIYPNTFDTYLVILNEKGLYLY 800
WD40-rpts
Query 801 NIITNEILKLNNDLLNNLYEFKGKKYMASTIFNNEIYVFILYEKKLLFFNHNMEFDSYDINLNEKINKMYLKDNILFLLS 880
WD40-rpts
Query 881 NSNIYFIFIEYLLINLLNKKFNVLKNCIHDIKDDTNGVIVNSNLSNNINSDIIHADNHIEKLEYQEKENEKKYVSQGHEL 960
WD40-rpts
Query 961 YITKLKFPQNFKILLFDFYYMTNGELYIAIFSKKKKIMIYKINLYHEDYNNRKQRNEENTILEIEAQLIAQFINFYIFEH 1040
WD40-rpts
Query 1041 INKVGSILCMKFFYNSEKKKIYLVFGGLEQFLFSWNFLKYPIIQKK 1086
WD40-rpts
No WD40-repeats found in QUERY=PF3D7_1231900 (Len=1086)!