Input parameters:

  Query = watermelon (Len=333)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (watermelon, Len=333):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPDSLSIKAHPSLSFEHPYPPTK 80  
WD40-rpts                    (_________________WD 1_________________)   (____________________WD

Query       81 LMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVE 160 
WD40-rpts       2____________________)           (_________________WD 3________________)   (___

Query      161 TQFIAHDKEVYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240 
WD40-rpts      _____________WD 4________________)      (__________________WD 5_________________

Query      241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSATHEINQLQWSAAQPDWI 320 
WD40-rpts      )    (_________________WD 6_________________)        (_________________WD 7_____

Query      321 ALAFSNKMQLLKV 333 
WD40-rpts      ___________) 

7 WD40-repeats found in QUERY=watermelon (Len=333):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    15-54       5.36  335.98  0.00184       17.5%     19.76
  WD 2:  Seg  5    58-103      6.59  386.67  0.00038       17.5%     41.63
  WD 3:  Seg 10   115-153      6.88  398.87  0.00026       25.0%     43.68
  WD 4:  Seg 13   157-194      7.10  408.14  0.00020       17.5%     56.12
  WD 5:  Seg 17   201-241      4.64  306.46  0.00461        7.5%     56.41
  WD 6:  Seg 21   246-285      7.56  426.89  0.00011       20.0%     51.08
  WD 7:  Seg 25   294-332      5.81  354.71  0.00103        7.5%     43.75

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   15-54     DSPHPL------YAMAISSPHSHSLNFP-NRIALGSFVEEYT-NRVDI
   WD 2   58-103    DPDSLSIKAHPSLSFEHPYPPTKLMFNP-SPLSSLLASSGDY-LRLWK
   WD 3  115-153    LNN--S------KTSEFCAPLTSFDWNEVEPKRIGTSSIDTT-CTIWD
   WD 4  157-194    -SVVET------QFIAHDKEVYDIAWG--EARVFASVSADGS-VRIFD
   WD 5  201-241    -STIIY------ESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD
   WD 6  246-285    -SVPVA------ELERHHSSVNAIAWAPRSCRHICSAGDDKQ-ALIWE
   WD 7  294-332    -GIDPM------SMYSATHEINQLQWSA-AQPDWIALAFSNK-MQLLK

   WD40 Template    TGECLR------TLSGHTSGVTSVSFSP-DGKRLVSGSEDGT-IKVWD