Input parameters:

  Query = CmaCh09G002380 (Len=148)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (CmaCh09G002380, Len=148):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSLQRHVLSTAVYVRCHKFSREIETETFSQAPESEWCYWPPRPPLIGDWLLGPSHGCGATTLQVLVFDDGWRREEKHFMN 80  
WD40-rpts                                                                                  (___

Query       81 ITSLGIIYLLLILLLAMEDPNAIIISSSVDRTCKVWSLSNGKLLRNIIFPSIIDAIALDPGEVSSMVV 148 
WD40-rpts      _______________WD 1_________________)                               

1 WD40-repeats found in QUERY=CmaCh09G002380 (Len=148):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    77-117      5.47  340.53  0.00160       22.5%     44.71

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   77-117    HFMNITSLGIIYLLLILLLAMEDPNAIIISSSVDRTCKVWS

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKR--LVSGSEDGTIKVWD