Input parameters:

  Query = sp_Q0ULF5_SEC31_PHANO (Len=1256)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (sp_Q0ULF5_SEC31_PHANO, Len=1256):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVRLREIPRTATFAWSPGPTQPLIATGTKAGAVDADFSNDTQLELWELKLDDAEQGVELQPVATVSVDSRFNDIAWSQPS 80  
WD40-rpts                                                                                      

Query       81 EQHPRGIIAGALDSGALVLWDAEKLRTGASDAQIDQIDKHTGPIQAIQFNPFRPNILASAGAKGELFVHDLDDESKSFRL 160 
WD40-rpts                 (___________________________WD 1__________________________)          

Query      161 GKAGANPDEYTTLDWNKKVAHILATGSSGGFVTVWDVKGKKENLTLNHFGRKTVSAVSWDPDVPTRLVTAIPTDQNPLVL 240 
WD40-rpts                                                                 (____________________

Query      241 AHDQGVLSLSWCPQDSDILLSCGKDNRTIAWNPHSGEQLGRISGRDKLDLPDQIQPVEPEPYSRPASFDGKIAVQTLQNT 320 
WD40-rpts      ____WD 2_______________________)                                                

Query      321 GANADQSKTAKQAPEGEDFFAQTHAEPQGASFSLKSPPKWLKRRAGVAFGFGGKLVRFGVVDAKSKITISTFAVDSDISQ 400 
WD40-rpts                                                                                      

Query      401 ASEDFDKALETGDLTSILESKISKAATDEEKADWTVIETLTSDNPRTKLVEYLGFADQSEEAPAEVKKEAQTNGDADEGS 480 
WD40-rpts                                                                                      

Query      481 SFFDNATDEGNFLSDLAARKGAKTNNPFQVYTGSESEADTKITRALMLGNFDAALDVCLKENRLSDAFMIAICGGEKCVA 560 
WD40-rpts                                                                                      

Query      561 KAQAAYFKRQSDAPNYLRLLASVVGKNLWDFVYNADLKDWKEVMATICTFADQAEFPDLCEALGDRLEEAIAEGTTSYRK 640 
WD40-rpts                                                                                      

Query      641 DASFCYLAGSKLEKVVVNWAQELQENENAGLEQSETDNSFSIHARSLQDFIEKVTVFRKVTQFKDTEQSKENDWKLEPLY 720 
WD40-rpts                                                                                      

Query      721 AKYVEYADIASAHGQLAIAEKYLDLLPQKYPAADVARNRVKQATRKGAAPAAAGQRQSQPAAAQRGQRVVPAYGAPAPQP 800 
WD40-rpts                                                                                      

Query      801 TPAQRTASPYAPANPLAPAQTNSPYAPVNPLSQQAQQATQQPPARAGGAYTPAGYQPAPVQQGYGGYGQQQQAPLAPPPQ 880 
WD40-rpts                                                                                      

Query      881 NFSNPNGPSIVPAANRGHIPAWNDTPDFGPPKTASRRGTPLNAVASPFPNQQQNYGPPGGASPGFPPQSRPTPPPPPKGP 960 
WD40-rpts                                                                                      

Query      961 PQGPPRMTSPPSQAGGAPPNAPNPYAPSPAANNYAPPPSGFAPPQQAPVQRGASPYQPPQSAAPPSNRYAPAPGSQPSAP 1040
WD40-rpts                                                                                      

Query     1041 SGMGGMPPPRNIAPPPGQFTPGASAYAPSPYAQSPAQQAPAAVAPPPRGPPQGPPRAGPPPGGPPQGGPPRPESRPGTGQ 1120
WD40-rpts                                                                                      

Query     1121 SQPAAPAAARYPPGDREHIPMVSRPIYEILGAEIQRVKAKAPAQYKAHVTDTEKRLNILFDHLNNEDLLKPDTIQQMNEL 1200
WD40-rpts                                                                                      

Query     1201 ASNIQAKQFDEAIAIFQDLMTNKNDEGSNWLVSDVITFDADVGVKRLIQFSKSTPA 1256
WD40-rpts                                                              

2 WD40-repeats found in QUERY=sp_Q0ULF5_SEC31_PHANO (Len=1256):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7    92-150      5.49  341.45  0.00156       25.0%     41.98
  WD 2:  Seg 16   220-272      3.29  250.55  0.02586       27.5%     24.12

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   92-150    LDSGALVL-------WDAEKLRTGASDAQIDQIDKHT-----GPIQAIQFNPFRPNILASAGAKGELFVHD
   WD 2  220-272    DPDVPTRLVTAIPTDQN------------------PLVLAHDQGVLSLSWCPQDSDILLSCGKDNRTIAWN

   WD40 Template    TGECLRTL-------SG------------------HT-----SGVTSVSFSP-DGKRLVSGSEDGTIKVWD