WDRR: WD40 Repeat Recognition
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JobID: 3LRD91483436654    Submitted: 2017-01-03 17:44:14

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Job status:  [Done] Total run time: 255815971 seconds.    [Download result as txt]    [Query sequence in FASTA]
Input parameters:
  Query = sp_Q9STX2_VEP1_ARATH (Len=388)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (sp_Q9STX2_VEP1_ARATH, Len=388):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSWWWAGAIGAAKKKLDEDEPSQSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYGVARRPRPTWNADHPIDYIQC 80  
WD40-rpts                                                                                      

Query       81 DVSDAEDTRSKLSPLTDVTHVFYVTWTNRESESENCEANGSMLRNVLQAIIPYAPNLRHVCLQTGTKHYLGPFTNVDGPR 160 
WD40-rpts                                                                                      

Query      161 HDPPFTEDMPRLQIQNFYYTQEDILFEEIKKIETVTWSIHRPNMIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGSK 240 
WD40-rpts                                                                                      

Query      241 KAWEGFMTASDADLIAEQQIWAAVDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEYGFEEGKNLGLVEMMKGKERVW 320 
WD40-rpts                                                                                      

Query      321 EEMVKENQLQEKKLEEVGVWWFADVILGVEGMIDSMNKSKEYGFLGFRNSNNSFISWIDKYKAFKIVP 388 
WD40-rpts                                                                          



No WD40-repeats found in QUERY=sp_Q9STX2_VEP1_ARATH (Len=388)!

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