Input parameters:
Query = PF3D7_1218900 (Len=717)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (PF3D7_1218900, Len=717):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MKKEFVEYNKKYFRNIQFVYDFLDKIGMKNSLNELKKESKIDYIKDYDLYFLDRNNQDISDDENIRDEEEKDEAENIDED 80
WD40-rpts
Query 81 FEDIDKTFFIYTMNKMNNSILCKAIDLFDRDIKEKYVLLQNVQNVKNINHKGRDIDENRNNILYDDNDDDNINNNNNNNN 160
WD40-rpts
Query 161 DDAVNTFDGYMYRPDQNNSLTIPFMKEKKENIFLKNDNKDDESLKLYNTNNVTHKVRMNSYNWDSYFTQDKEIYKKLNVS 240
WD40-rpts
Query 241 IVHNDISNNINEQTNKPSNILCIQYIDIYHKQNNKYINSENIIFFQRFFPLFLLVGYANGNIILFLILYEKENKEKEQNE 320
WD40-rpts
Query 321 KNGKKNEKNEISEKNEKNEKNEKNEKNEKNEKNEINKKDECHNDNHIYLYQQLEHISLGSPVMHIDINYQDNLFIASTMN 400
WD40-rpts
Query 401 GDICICQINMKEIEDIKNKLIETNDLNHDTKIKNDNPYMFLKDVLKYHMKYSIQCLFNEDYSLFCSIANDKNLIIYEKIV 480
WD40-rpts
Query 481 ANNKRNEKIDDICSNNINNNIYDDKPNYTYEKKKIIGLPDTPTNMLWVKHNNKEIIIISMLNSNHIIFLNSSNYLIENKL 560
WD40-rpts
Query 561 YLFDLSKENNNEHEESKNEKHNILALHYHKKKNILVICTDTSKIFVYSFKEESIIKTIYGCVLNSLSFPTIQINISGNFI 640
WD40-rpts
Query 641 YVTSEDKVHGTYILIFDIKSGNIINTINNGFKIRCFQLLKNYICPSTFNVNSNNIDTNKKTLLILGSFDKKLHFYSN 717
WD40-rpts
No WD40-repeats found in QUERY=PF3D7_1218900 (Len=717)!