WDRR: WD40 Repeat Recognition
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JobID: 2R8311531121457    Submitted: 2018-07-09 15:30:57

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Job status:  [Done] Total run time: 208129744 seconds.    [Download result as txt]    [Query sequence in FASTA]
Input parameters:
  Query = JIP3_951-1200 (Len=250)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (JIP3_951-1200, Len=250):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 RPEPEPSGDPTGAGSSAAPTMWLGAQNGWLYVHSAVANWKKCLHSIKLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDG 80  
WD40-rpts                                                                                      

Query       81 QWDLSNYHLMDLGHPHHSIRCMAVVYDRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDST 160 
WD40-rpts                                                                                      

Query      161 LRLYHAHTHQHLQDVDIEPYVSKMLGTGKLGFSFVRITALLVAGSRLWVGTGNGVVISIPLTETVVLHRGQLLGLRANKT 240 
WD40-rpts                                                                                      

Query      241 SPTSGEGARP 250 
WD40-rpts                



No WD40-repeats found in QUERY=JIP3_951-1200 (Len=250)!

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