Input parameters:

  Query = CmaCh11G005890 (Len=102)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (CmaCh11G005890, Len=102):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPLQVKLLVFLIICQATVCCTKSFTVKSTLVEHSQWITDVCVSPRTLKIATSSGDRTVKVWDVDNSPELWDMTENKTRTL 80  
WD40-rpts                             (_________________WD 1________________)   (______________

Query       81 LAHDKLGSALAASNDSCVKVWQ 102 
WD40-rpts      __WD 2_______________)

2 WD40-repeats found in QUERY=CmaCh11G005890 (Len=102):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    24-62       9.96  525.97  5.1e-06       35.0%     54.02
  WD 2:  Seg  7    66-102      5.32  334.46  0.00193       20.0%     45.01

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   24-62     FTVKSTLVEHSQWITDVCVSPRTLKIATSSGDRTVKVWD
   WD 2   66-102    SPELWDMTENKTRT-LLAHDKLGSAL-AASNDSCVKVWQ

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD