WDRR: WD40 Repeat Recognition
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JobID: 11BXK1506581088    Submitted: 2017-09-28 14:44:48

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Job status:  [Done] Total run time: 232670936 seconds.    [Download result as txt]    [Query sequence in FASTA]
Input parameters:
  Query = NP_000073 (Len=396)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (NP_000073, Len=396):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLGFLSARQTGLEDPLRLRRAESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQS 80  
WD40-rpts                                                                                      

Query       81 YYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVA 160 
WD40-rpts                                                                                      

Query      161 VGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA 240 
WD40-rpts                                                                                      

Query      241 NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYT 320 
WD40-rpts                                                                                      

Query      321 VYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTKSQLNPAFEDAWSSSDEEG 396 
WD40-rpts                                                                                  



No WD40-repeats found in QUERY=NP_000073 (Len=396)!

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