Input parameters:
Query = tr_D8PFU2_D8PFU2_9BACT (Len=742)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (tr_D8PFU2_D8PFU2_9BACT, Len=742):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MITERFQLMLKPVHLRTWFDRLARAVITVGGLATIISILGIFFFLFREVTPLFTAPSAKLTQRLSVPALLVDEGPAQVAV 80
WD40-rpts
Query 81 DEHREIAQVFTSGAIQFFDLASGQPIPLETPAQVKARQITAMASGGGNAPRLAVGTADGEVLFLKVGTTTEFTDQGERRK 160
WD40-rpts
Query 161 RPHIRAGQPIPLTKSPIVRLAYRANDQGSLLALLSKGGRLLVARIAADDVAGHHPIITELPQPRGEVTALALDALLENLY 240
WD40-rpts
Query 241 VGTADGQVVHVGLSETEPPEMRAAYTVAASSTAVTTLGFLSGDRSLVVMSGDGAVSTWGLVRRADAPSGWTLTQIHTLRA 320
WD40-rpts
Query 321 HNAPVTAFAPSQRVKGFVTGDRKGNLFLHHATSSQTLLRLANSEFPIRAVAFAPKGDGLIALDGAGQLSLYQVQNAYPEV 400
WD40-rpts
Query 401 TLETLFGKVWYEGYDQPAHVWQSSSGSDDVEPKLGLLPLAFGTLKGTMYALFLAVPIAILAAMCTSQFMHQDLRAKIKPI 480
WD40-rpts
Query 481 IEVMAALPTVVLGFLAGLWLAPLLERMLPAVAGMALVLPLLVVLASFGWYLCPLSVKRHLPQGQEALLLIPLLGLGIAGC 560
WD40-rpts
Query 561 LWANSFIEGWWFDGNVKAWLSSRLGIQYDQRNALIVGIVMGFAIVPVIYSIAEEALSNVPKIQIAGSLALGATRWQTVLH 640
WD40-rpts
Query 641 LVLLSASPGIFSAVMIGFGRAIGDTMIVLMATGNTPILDWNWANGFRTLSANIAVEIPEAPHGGSLYRVLFLAALLLFIV 720
WD40-rpts
Query 721 TFVINSLAELIRQRLRDKYSHG 742
WD40-rpts
No WD40-repeats found in QUERY=tr_D8PFU2_D8PFU2_9BACT (Len=742)!