Input parameters:

  Query = gi_57638695_gb_AAW55385.1_ (Len=229)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_57638695_gb_AAW55385.1_, Len=229):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 AMDPQQRLLLEVAWEALENAGQPPESLKGSSTGVFVGIGSDDYSRLSVNSGDLNRIDAYSSLGSARSIAVGRVAYVLGLQ 80  
WD40-rpts                         (________________________________WD 1________________________

Query       81 GPTLQLDTSCSSSLLGIHLACQSLRTGECNLALAGGVNLMLSPAMTISFCKLKALAPDGRCKTFDASADGYSRGEGCGVV 160 
WD40-rpts      _______)                                                                        

Query      161 VLKRLSEAIADGDNIIALIRGSAVNHDGKSNGLTAPNGLAQERLIRQALKEARVEPTQIQYVETHGTGT 229 
WD40-rpts                                                                           

1 WD40-repeats found in QUERY=gi_57638695_gb_AAW55385.1_ (Len=229):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    20-88       2.87  233.22  0.04388       27.5%     10.03

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   20-88     AGQPPESLKGSSTGVFVGIGSDDYSRLSVNSGDLNRIDAYSSLGSARSIAVGRVAYVLGLQGPTLQLDT

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDG--------------KRLVSGSED----G-----------TIKVWD