Input parameters:

  Query = gi_186687058_ref_YP_001870201.1_ (Len=513)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186687058_ref_YP_001870201.1_, Len=513):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGFELERLTASSVIHAERTILCSLGASAVLCLSAPFFLNTDRITTGILLGAGTISAGLFGVSAQISESKEKVYKSLLEAD 80  
WD40-rpts                                                                                      

Query       81 LKALKQHLQGQAAYNYVTTAIDAKRRVADYVNRLPITERPRWIAEYQLQGLVTLPEPPAQHQPSRTGIPNPDIADIDEEF 160 
WD40-rpts                                                                                      

Query      161 VQSIINPGAMKVLQAIAANYPEYIRIDSAWIDELCDAASNQNMTLRSNHHFYLSGGTQSGKSTLAGVIINKIGAKSQTPA 240 
WD40-rpts                                                    (_________________________________

Query      241 IVIGSDPKDDVTRWLCKFSRKFDGMKALRDWITFATDQIDKQKARVSIVGGECHGVPELFLAQDEVDSVYGGGKGLPGMV 320 
WD40-rpts      _WD 1_________________________________)                                         

Query      321 DADTAKDLQGFWNYIIKFTAGLKGHGVFMGQSPLSGETGFSRPSLKNVCFIAVGQTSSYILDHPQDFLNVKKEILEILRQ 400 
WD40-rpts                                                                                      

Query      401 ACEMLDKAGVRYALVIPTRGNPFVALIPEFDIKGLEQKQDSKPNNDTVNSSKNNQQSSQQQVDWYEEIRKWATELGRRPH 480 
WD40-rpts                                                                                      

Query      481 FQEIKQKWHELTGQELNEKGVTLLLENLGFHDN 513 
WD40-rpts                                       

1 WD40-repeats found in QUERY=gi_186687058_ref_YP_001870201.1_ (Len=513):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   207-279      3.18  245.93  0.02978       17.5%     23.33

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  207-279    SNHHFYLSGGTQSGKSTLAGVIINKIGAKSQTPAIVIGSDPKDDVTRWLCKFSRKFDGMKALRDWITFATDQI

   WD40 Template    TGECLRTLSGHTSGVTS--------VSFSPDGKRLVSGSEDGT---------IKVWD----------------