Input parameters:

  Query = gi_186686615_ref_YP_001869811.1_ (Len=290)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186686615_ref_YP_001869811.1_, Len=290):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAQASIGIIGGSGLYKMDALKDVEEVHIQTPFGSPSDALILGTLDGTRVAFLARHGRNHTLLPSELPFRANIYAMKQLGV 80  
WD40-rpts                                                  (_______________________WD 1________

Query       81 KYLISASAVGSLKEEAKPLDMVVPDQFIDRTKNRISTFFGEGIVAHIAFGDPICKNLAAVLADAIASLNLPDVTLHRSGT 160 
WD40-rpts      _______________)                                                                

Query      161 YVCMEGPAFSTKAESNLYRSWGATIIGMTNLPEAKLAREAEIAYSTLALVTDYDCWHPDHDSVTVELVIGNLLRNAVNAQ 240 
WD40-rpts                                                                                      

Query      241 KVIQETVRRLSENPPTSEAHSALQYAILTQLDKAPAATKEKLGLLLQKYL 290 
WD40-rpts                                                        

1 WD40-repeats found in QUERY=gi_186686615_ref_YP_001869811.1_ (Len=290):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    45-96       2.94  236.21  0.04007       25.0%     11.98

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   45-96     DGTRVAFLARHGRNHTLLPSELPFRANIYAMKQLGVKYLISASAVGSLKEEA

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPD------------GKRLVSGSEDGTIKVWD