Input parameters:

  Query = gi_186686595_ref_YP_001869791.1_ (Len=1638)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186686595_ref_YP_001869791.1_, Len=1638):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVNMQTSDNQDPIDGVAIIGMVGRFPGAGNVDEFWRNLCEGLESTTFFQDEELDPSIDPNLCKDPSYVKARGIIPGGETF 80  
WD40-rpts                                                                                      

Query       81 DAAFFGINPMEAVVMDPQARVFLELVYEALENAGYESESFDGLIGLYAGCGQNTYFANHISGRMEIVDRIGEFQTMLANE 160 
WD40-rpts                                                                                      

Query      161 KDFLTTRAAYKLNLKGPAVSVNTACSTSLVAIIQACQALSSYQCDMALAGGVSMTTPQNSGYIAQEGSMLSGDGHCRPFD 240 
WD40-rpts                                                                                      

Query      241 ASAQGTMFNNGAGIVVLKRLEDALNEGDRIYAVIRGSGINNDGADKVSFTAPSVDGQAEAIAMAQAYANFHPETISYIEA 320 
WD40-rpts                                                                                      

Query      321 HGTATPLGDPIEIEALTQAFRVHTDAKQFCAIGSLKSNVGHLVAAAGVAGLIKTVLALHYKKIPPSLNFEAPNPKIDFAN 400 
WD40-rpts                                                                                      

Query      401 SPFYVNTKLAEWSQGETPRRAGVSSFGVGGTNAHIVLEEAPQIQNSGSSRPQQLLLLSAKTSTALEAATANLQQYLQYNA 480 
WD40-rpts                                                                                      

Query      481 EINLADVAYTLQRGRKALNYRRSVVCHDITDAIAALQSLDPNQINTRHTVIRNLAVAFMFPGQGSQYVDMGLNLYNREPV 560 
WD40-rpts                                                                                      

Query      561 FQEVVDECAEILKPLLGGDLRRIIYPAPSDRETAAIALKQTCFTQPALFVIEYALAQLWQSWGVKPQAMIGHSIGEFVAA 640 
WD40-rpts                                                                   (__________________

Query      641 CIAGVFTLEDALMLVANRGRFMWELPQGAMLSVRLPAQEVEPRLIPELAIAAINAPSLCVVSGPTEAIAALQKQLESEEV 720 
WD40-rpts      ____________________WD 1______________________________________)                 

Query      721 VCRPLHTSHAFHSPMMDDIIAPFAEVVRKVKLSPPQIPFVSTVTGDWITAQQATDPMYWATHLRQTVRFAEGIQTLWQQP 800 
WD40-rpts                                                                                      

Query      801 ERVLLEVGPRITTTTLARQQAKDIKQQIAIASLSDNAENEAEWTALLKAVGQLWLAGVSIDWSNFYQRETRQRISLPTYP 880 
WD40-rpts                                                                                      

Query      881 FERQRFWIDPLPHPNRAATPKPLNPQLEKTQDMTKSPQQKLIPLLKEIIEETSGLEIASVDDSTTFLEMGLDSLSLTQVG 960 
WD40-rpts                                                                                      

Query      961 LALKKKFQVKVTLRQLLEIYPNLGTLADFINPALSPETLSALGLTETVAEPIPEVPLPAPATTSPTLVVHEVHTNGSAPQ 1040
WD40-rpts                                                                                      

Query     1041 ISPQPAASSFFENVINQQLQIMSQQLSLLGNNSQAVTIPVVPAATPQNNGVKPQNAVSIPATQTSKESPASVDTESNGAK 1120
WD40-rpts                                                                                      

Query     1121 KAFGAAARIEKTQTKTLTTQQRTHLDKIIQRYTQRTKKSKEYTQSHRPYLADPRTVSGFNPTMKEMVYPIVASRSSGSKL 1200
WD40-rpts                                                                                      

Query     1201 WDLDGNEYVDLSNGFGLNLFGWSPPFITEAIEAQLKLGMEIGPQTPLVGEVAKLMCELTNFDRAAFCNTGSEAVLGAMRM 1280
WD40-rpts                                                                                      

Query     1281 ARTITGRNLIAIFSGAYHGILDEVIVRGTKKLRSIPAAPGIPPEMVENILVVDYDSPESLEILRSRADELAAVMVESVQS 1360
WD40-rpts                                                                                      

Query     1361 RRPEYQPKEFLQQLRDFTEEAGIALIFDEIVTGFRIHPGGAQAHFGIKADIATYGKIVGGGLPIGVIAGKSQYMDALDGG 1440
WD40-rpts                                                                                      

Query     1441 FWQFGDDSVPEVGVTYFAGTFVRHPLALAAAKAVLQHLKQSGPSLQQNLNARTDKFVAELMGYFQKVQAPFTAYNFGSLF 1520
WD40-rpts                                                                                      

Query     1521 IVKSAPEFPYGDLLFYLLRDKGVHTWDHRPCFLTTAHSEADLAFVMAAFKESIAEMQSAGFLSAPPIEVTNSEVTNNSLR 1600
WD40-rpts                                                                                      

Query     1601 NRPPQPNAKLGRDPQGNPAWYIPDTERPGKYLQVASVS 1638
WD40-rpts                                            

1 WD40-repeats found in QUERY=gi_186686595_ref_YP_001869791.1_ (Len=1638):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 15   622-703      3.17  245.75  0.02995       17.5%     26.11

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  622-703    WGVKPQAMIGHSIGEFVAACIAGVFTLEDALMLVANRGRFMWELPQGAMLSVRLPAQEVEPRLIPELAIAAINAPSLCVVSG

   WD40 Template    TGECLRTLSGHT----------SGVT------------------------SVSFS--------PDGKRLVSGSEDGTIKVWD