Input parameters:

  Query = gi_186686392_ref_YP_001869588.1_ (Len=645)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186686392_ref_YP_001869588.1_, Len=645):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEVDINADGSVTVTDDGRGIPVD 80  
WD40-rpts                               (_____________________WD 1____________________)        

Query       81 THSRTGKSALETVMTVLHAGGKFGGGGYKVSGGLHGVGISVVNALSEVVEVTVWRDKKVHLQRYERGIPVTELQTKPYKE 160 
WD40-rpts                                                                                      

Query      161 ARTGTSVTFKPDTQIFTTSIEFDYITLSGRLRELAYLNAGVKITFTDNRLELLKSDTPKVESYNYKGGIKEYIAYMNREK 240 
WD40-rpts                                                                                      

Query      241 QPLHEEIIYVQGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLSG 320 
WD40-rpts                                                                                      

Query      321 EHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPAIADSILDKAIQAFKAAEAARHARELV 400 
WD40-rpts                                                                                      

Query      401 RRKSVLESSPLPGKLADCSSRDPSESEIFIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEVQSLIT 480 
WD40-rpts                                                                                      

Query      481 ALGLGVKGDEFDSNQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLIEQGFIYIACPPLFKVERGRNHEYCYSDREK 560 
WD40-rpts                                                                                      

Query      561 NQAIAKFPANANYTIQRFKGLGEMMPQQLWDTTMNPETRKMKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNF 640 
WD40-rpts                                                                                      

Query      641 TDLDI 645 
WD40-rpts           

1 WD40-repeats found in QUERY=gi_186686392_ref_YP_001869588.1_ (Len=645):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    26-72       3.08  241.94  0.03365       17.5%     23.66

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   26-72     YIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEVDINADGSVTVTD

   WD40 Template    TGECLRTLSGHTSGVTSVSF-------SPDGKRLVSGSEDGTIKVWD