Input parameters:

  Query = gi_186685868_ref_YP_001869064.1_ (Len=901)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186685868_ref_YP_001869064.1_, Len=901):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRILKIQTLRGPNYWSIRRHKLIVMRLDLETLAETPSNEIPGFYEGLVEALPSLEGHYCSPGCRGGFLMRVKEGTMIGHI 80  
WD40-rpts                                                                                      

Query       81 VEHVALELQELAGMHVGFGRTRETATPGIYQVVIEYQNEEAGRYAGRAAVRLCQSIVDRGRYPKAELEQDIQDLKDFTRD 160 
WD40-rpts                                                                                      

Query      161 ASLGPSTEAIIKEAEKRGIPWMPLEARFLIQLGYGVNQKRMQATMTDNTSILGVELACDKEATKRILAAAGAPVPRGTVI 240 
WD40-rpts                                       (_________________________________WD 1_________

Query      241 NFLDDLEQAIEYVGGYPIVVKPLDGNHGRGITIDIRTWEEAEAAYEAARQVSRSIIVERYYVGRDHRVLVVNGKVVAVAE 320 
WD40-rpts      _______________________)                                                        

Query      321 RVPAHVIGNGRSTISELIEETNLDPNRGEGHDNVLTKIELDRTSYQLLERQGYTLNSVPPKGTICYLRATANLSTGGSAV 400 
WD40-rpts                                                                                      

Query      401 DRTDEIHPENLWLAQRVVKIIGLDIAGLDIVTTDISRPLREVDGVIVEVNAAPGFRMHVAPSVGIPRNVAGAVMDMLFPN 480 
WD40-rpts                                                                                      

Query      481 EQSSQIPILSVTGTNGKTTTTRLLAHIYKQTGKVVGYTTTDGTYIGDYLVEAGDNTGPQSAHVILQDPTVEVAVLETARG 560 
WD40-rpts                                                                                      

Query      561 GILRSGLGFEAANVGVVLNVAADHLGIGDIETIEQLANLKSVVAEAVFPDGYAVLNADDHRVAAMSEKTKANIAYFTMNP 640 
WD40-rpts                                                                                      

Query      641 DSELVRKHIQKGGVAAVYESGYLSIVKGDWTHRIERAENIPLTMGGRAPFMIANALAASLAAFVQNVTIEQIRSGLKTFR 720 
WD40-rpts                                                                                      

Query      721 ASVSQTPGRMNLFNLGNYHALVDYAHNAASYEAVGSFVRNWTTGQRIGVIGGPGDRRDEDFVTLGKLAAQIFDYIIVKED 800 
WD40-rpts                                                                                      

Query      801 DDTRGRLRGSAAQLIIQGITQVKPDSRYESILDETQAINKGLDMAPDNSLVVILPESVTRAIKLIKLRGLAKEETHQQNT 880 
WD40-rpts                                                                                      

Query      881 GTAIADSQNGIAPSSVVNTLL 901 
WD40-rpts                           

1 WD40-repeats found in QUERY=gi_186685868_ref_YP_001869064.1_ (Len=901):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   194-264      3.19  246.55  0.02923       20.0%     -3.59

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  194-264    YGVNQKRMQATMTDNTSILGVELACDKEATKRILAAAGAPVPRGTVINFLDDLEQAIEYVGGYPIVVKPLD

   WD40 Template    TGECLRTLSGHTSGVTSV-------S-------------FSPDGKRLVS-----------GSEDGTIKVWD