Input parameters:

  Query = gi_186685830_ref_YP_001869026.1_ (Len=99)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186685830_ref_YP_001869026.1_, Len=99):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASSSLDDTIKVWSVTTGREIRTLSGHSNEVKYVAISSDGQILASHTWDKTIKLWEVATGREICTLSLFDPAHSVAFSPD 80  
WD40-rpts                       (_________________WD 1________________)   (________________WD 2

Query       81 GSWLAAGDVSGNIKIWRRS 99  
WD40-rpts      ________________)  

2 WD40-repeats found in QUERY=gi_186685830_ref_YP_001869026.1_ (Len=99):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    18-56      10.45  546.24  2.7e-06       47.5%     55.15
  WD 2:  Seg  7    60-97       8.60  470.01  2.9e-05       42.5%     53.66

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   18-56     GREIRTLSGHSNEVKYVAISSDGQILASHTWDKTIKLWE
   WD 2   60-97     GREICTLSLF-DPAHSVAFSPDGSWLAAGDVSGNIKIWR

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD