Input parameters:

  Query = gi_186685464_ref_YP_001868660.1_ (Len=320)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186685464_ref_YP_001868660.1_, Len=320):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRIAKDITELIGRTPLVQLNKIPQASGAVARIVVKLESMNPASSVKDRIGASMVEMAEEAGLIHPGKTVLVEPTSGNTGI 80  
WD40-rpts                                                                                      

Query       81 ALAMVAAAKGYHLILTMPDTMSHERRSMLKAYGAQLELTPGVEGMRGAIGRAEQILAQTPNAYMLQQFRNPANPKVHAET 160 
WD40-rpts                                                                                      

Query      161 TAEEIWNDTDGEVDILVAGVGTGGTITGVAEVIKGRKPSFQAIAVEPSSSPVLTGGKSGPHKIQGIGAGFVPAIYRPELV 240 
WD40-rpts              (__________________________WD 1_________________________)               

Query      241 DEVIQVADEQAIAYSRRLAKEEGLLSGISTGAALYAAIQVAQRPENAGRLIVMIQPSFGERYLSTSLFKDPEENEWLSKV 320 
WD40-rpts                                                                                      

1 WD40-repeats found in QUERY=gi_186685464_ref_YP_001868660.1_ (Len=320):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   169-225      2.81  230.54  0.04759       22.5%      8.44

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  169-225    TDGEVDILVAGVGTGGTITGVAEVIKGRKPSFQAIAVEPSSSPVLTGGKSGPHKIQG

   WD40 Template    TGECLRTL---SGHTSGVTSV--------------SFSPDGKRLVSGSEDGTIKVWD