Input parameters:

  Query = gi_186685273_ref_YP_001868469.1_ (Len=244)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186685273_ref_YP_001868469.1_, Len=244):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNMKPQNFRKSAELIGAICGGLMISLPVIPQAMAQQSVGQESTPKINPCPRIFYEEPHNSRVVVPQGCPPNALTQRLAAQ 80  
WD40-rpts                                                                                      

Query       81 GLLPNSANPSQEQTRLGVGGESPETGVTPPRPASGDQTQQPSPGAVSTNQPQQLQPRQTPSATIALANGTVNVRLVNDTA 160 
WD40-rpts                                                                                      

Query      161 ANVTFQVIGDTAPRSLQGKSNVILQGLRAPVTVTFEREDGGQLIVTPQASSEPGSLEVRFNEATNAAQGRSAMRIERNGS 240 
WD40-rpts                      (___________________WD 1___________________)                    

Query      241 VFLN 244 
WD40-rpts          

1 WD40-repeats found in QUERY=gi_186685273_ref_YP_001868469.1_ (Len=244):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   177-220      2.90  234.45  0.04227       30.0%     42.52

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  177-220    QGKSNVILQGLRAPVTVTFEREDGGQLIVTPQASSEPGSLEVRF

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLV----SGSEDGTIKVWD