Input parameters:

  Query = gi_186685270_ref_YP_001868466.1_ (Len=143)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186685270_ref_YP_001868466.1_, Len=143):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNSLSNKLSIVLRGSICLLGLVSVGNFLAAPANAQQATARGAVTLIRPSGTFLSVTGELILPSGSDYSAGIKIAPTYGGI 80  
WD40-rpts                             (______________________WD 1______________________)       

Query       81 AGSNEETITSLTITPGVVKTTTLSSPNSLIDAVTTSLNNSVSIEDTITIIRAGSGINSLGALD 143 
WD40-rpts                                                                     

1 WD40-repeats found in QUERY=gi_186685270_ref_YP_001868466.1_ (Len=143):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    24-73       3.79  271.32  0.01365       12.5%      8.91

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   24-73     VGNFLAAPANAQQATARGAVTLIRPSGTFLSVTGELILPSGSDYSAGIKI

   WD40 Template    TGECLRTLSG----------HTSGVTSVSFSPDGKRLVSGSEDGTIKVWD