Input parameters:

  Query = gi_186684781_ref_YP_001867977.1_ (Len=183)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186684781_ref_YP_001867977.1_, Len=183):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MYCGGRMRQQEPGVTVWFTGLSGAGKTTICQFVEKELRIQGYRVEVLDGDAVRQNLCKGLSFSKEDREENIRRIGFVAHL 80  
WD40-rpts                                             (________________________________________

Query       81 LARNNVIVLVSTISPYRKVREEVRQNIPSFIEVYVNASLEVCEQRDVKGLYKKARMGEIKNFTGIDDPYEIPLRPEVECK 160 
WD40-rpts      _________WD 1_________________________________________________)                 

Query      161 TNQETLYQSATKVLEKLEELGYI 183 
WD40-rpts                             

1 WD40-repeats found in QUERY=gi_186684781_ref_YP_001867977.1_ (Len=183):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    40-143      3.34  252.66  0.02424       30.0%     14.66

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   40-143    QGYRVEVLDGDAVRQNLCKGLSFSKEDREENIRRIGFVAHLLARNNVIVLVSTISPYRKVREEVRQNIPSFIEVYVNASLEVCEQRDVKGLYKKARMGEIKNFT

   WD40 Template    TGECLRTLSG-----------HTS-----------------------GVTSVSFSPD--------------GKRLVSGS------EDG----------TIKVWD