Input parameters:

  Query = gi_186684736_ref_YP_001867932.1_ (Len=547)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186684736_ref_YP_001867932.1_, Len=547):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNTAELLVQCLENEGVQYIFGLPGEENLHVLEALKHSSIKFITTRHEQGAAFMADVYGRLTGKAGVCLSTLGPGATNLMT 80  
WD40-rpts                                         (_________________________________WD 1_______

Query       81 GVADANLDGAPLVAITGQVGTDRMHIESHQYLDLVAMFAPVTKWNKQIVRPSITPEVVRKAFKRSQSEKPGAVHIDLPEN 160 
WD40-rpts      __________________________)                                                     

Query      161 IAAMPVEGKPLRKDNSEKTYASFASIRAAAAAICQAVNPLILVGNGAIRAQASDAVTQFATLLNIPVANTFMGKGVIPYT 240 
WD40-rpts                                                                                      

Query      241 HQLALWSVGLQQRDFITCGFDNTDLVIAIGYDLIEFSPKKWNRNGEIPIVHIGVSPAEIDSSYIPNAEVVGDISDSLYEI 320 
WD40-rpts                                                                                      

Query      321 LKLADRQGKPDPFAISLRSDIRADYEQYAHDDGFPIKPQKLIYDLRQVMGPDDIVISDVGAHKMWMARHYHCHSPNTCII 400 
WD40-rpts                                                                                      

Query      401 SNGFAAMGIAIPGALAAKLVHPKRKVVAVTGDGGFMMNSQELETALRVGTPFVTIIFNDGGYGLIEWKQENHFGKGNSSF 480 
WD40-rpts                                                                                      

Query      481 VHFSNPDFVKYAESMGLKGYRVESALDLIPTLKEALAQDVPAVIDCPVDYRENHRFSQKAGELSCAV 547 
WD40-rpts                                                                         

1 WD40-repeats found in QUERY=gi_186684736_ref_YP_001867932.1_ (Len=547):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    36-107      3.29  250.51  0.02589       15.0%     15.30

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   36-107    HSSIKFITTRHEQGAAFMADVYGRLTGKAGVCLSTLGPGATNLMTGVADANLDGAPLVAITGQVGTDRMHIE

   WD40 Template    TGECLRTLSGH-------------TSGVTSVSFSPDGKR-------------------LVSGSEDGTIKVWD