Input parameters:

  Query = gi_186684015_ref_YP_001867211.1_ (Len=409)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186684015_ref_YP_001867211.1_, Len=409):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MARAKFERNKPHLNIGTIGHVDHGKTTLTAAITMTLAALGQATAKGYDQIDNAPEEKARGITINTAHVEYETENRHYAHV 80  
WD40-rpts                                                                      (_______________

Query       81 DCPGHADYVKNMITGAAQMDGGILVVAATDGPMPQTREHILLAKQVGVPSLVVFLNKEDLMDDPELLELVELELRELLSS 160 
WD40-rpts      ______________WD 1_____________________________)                                

Query      161 YDFPGDDIPIIKGSGLQALEAMTKNPKTKKGENPWVDKIYELMDAVDSFIPTPERDVDKPFLMAVEDVFTITGRGTVATG 240 
WD40-rpts                                                                                      

Query      241 RIERGKVKVGDTVELIGLKDTRTTAVTGIEMFKKSLEEGLAGDNAGVLLRGLKKEDIERGMVIAKPGSITPHTQFEGEVY 320 
WD40-rpts                                                                                      

Query      321 VLTEKEGGRKTPFFAGYRPQFYVRTTDVTGTIKAYTSDEGKEVEMVMPGDRIKMTVELINAIAIEQGMRFAIREGGRTIG 400 
WD40-rpts                                                                                      

Query      401 AGVVSKIIK 409 
WD40-rpts               

1 WD40-repeats found in QUERY=gi_186684015_ref_YP_001867211.1_ (Len=409):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    65-128      3.73  268.88  0.01472       27.5%      2.84

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   65-128    TAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGPMPQTREHILLAKQVGV

   WD40 Template    TGECLR-TLSGHTSGVTSVSF------------SPDGKRLVSGSEDGTIK-----------VWD