Input parameters:

  Query = gi_186683495_ref_YP_001866691.1_ (Len=303)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (gi_186683495_ref_YP_001866691.1_, Len=303):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSSLVALSNSLADTVEQAGSAVVAVNGGTRVSPSGIHWRNGIIVTSDESLQRYDDITITLSNGSTVPVTLVGHDSSTDIA 80  
WD40-rpts                                                                                      

Query       81 VFKLENVEIPVAKIGDAKTLKVGHLVLGLSRGSEGDLRAAMGAVSVVSGAWRSMNGGNIDQFIRPDITLYSGFAGGPLVD 160 
WD40-rpts                                                                                      

Query      161 AAGFVVGMNTSGRRGTALTIPTATVDRVVDQLVAKGRISKGYLGVGMQPVRLPKNLKTALNLTSATGVIVVNVESSGPAD 240 
WD40-rpts                                        (________________________WD 1_________________

Query      241 NAGVLLGDILVTFDGVTVGDTGDVLALLNSSDRIGKTVNLQVIRGGVLIELAIAVGERPTKEE 303 
WD40-rpts      _______)                                                       

1 WD40-repeats found in QUERY=gi_186683495_ref_YP_001866691.1_ (Len=303):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 14   195-248      3.08  241.86  0.03374       17.5%      1.18

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  195-248    KGRISKGYLGVGMQPVRLPKNLKTALNLTSATGVIVVNVESSGPADNAGVLLGD

   WD40 Template    TGECLRTLSGHTSGVTSVS---------FSPDGKRLVSGSEDG-----TIKVWD