Input parameters:

  Query = ZK994.6 (Len=113)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ZK994.6, Len=113):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLNQTFTMGSNKEERCREFCIEDAINGFIPRARSSGPRSSMKNKIDENVRRVRSETASLFSSTCKLPQLDGSIASEKKTC 80  
WD40-rpts      (________________________________________WD 1___________________________________

Query       81 TIRPWSRTQDELRKFKETLKSTTVSAKTATKSN 113 
WD40-rpts      _____)                           

1 WD40-repeats found in QUERY=ZK994.6 (Len=113):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-86       3.48  258.59  0.02020       20.0%      5.28

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-86     MLNQTFTMGSNKEERCREFCIEDAINGFIPRARSSGPRSSMKNKIDENVRRVRSETASLFSSTCKLPQLDGSIASEKKTCTIRPWS

   WD40 Template    TGECLRTLSGH----------------------TSGVTSVSFS------------------------PDGKRLVSGSEDGTIKVWD