Input parameters:

  Query = ZK973.1 (Len=745)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ZK973.1, Len=745):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKRQRLVDKEWILQFPIEYFIHKEVHELNSTQAQRLVSLFKNGCETAYIARYRGDVHGYLAPEKIRKAMEAYVDAKNLNN 80  
WD40-rpts                                                                                      

Query       81 KVSSAISTVTAKVAGAQEKIIVTERFKRCEEFDEVTDISKEYSTGTRKTKANIARALGLEPPAQSILDGNFVDFKSLLSN 160 
WD40-rpts                                                                                      

Query      161 GLKTVKDVEEHLKICLADLINRDEEVRKVSANIDILKKECRVSAKLSREAEKNRKDLEKRGIIEKYKNFIGEKWNAEDIR 240 
WD40-rpts                                                                                      

Query      241 DHTVSALNKGFDEGIITWKIECEFNDAKYIHPFSRKSVYFGMKNFYQEALAYSIKNYFIPRIERKMANHLKDKAKDRSIV 320 
WD40-rpts                                                                                      

Query      321 LFGENVDQLLSQEGIRDKFVIALDPGRSKIKTAFLKPTGEVVDMSSFSIYGTRFDGGGVDLLKKWSQQTERKDIVFAIGN 400 
WD40-rpts                                                                           (__________

Query      401 GTNTYNTQIAVSDMINSNVFPKEINVSYCIVPEHGASKYSCTPSAIEEFGENAEITEISAVSIGRRLIDPMSEYVKIEPQ 480 
WD40-rpts      _________________________WD 1___________________________________)               

Query      481 HLGKGQYQLSVDPKKLNESLLNVVRDRVSFNGVDLNTASKNLLQRINGLNEKTAKEIVQYREQNGRFRSRAELKEVKGIG 560 
WD40-rpts                                                                                      

Query      561 ALTFQQCAGFLTVSRPDDAEDGPPKKKFKKSSTSKEWNPFDETIVHPDDYRTGESLLGKLNVSIEDITGRIKSFSISRLT 640 
WD40-rpts                                                                                      

Query      641 AEEAKVLNLLQNLTLKTKMKPPPPLRTKVGQIRDLAEGQRFTGTVSNKTDFGVFIDIGVGQDGLAHISHFKDGHYSLMLP 720 
WD40-rpts                                                                                      

Query      721 SVNDSVEVVIDKIREDGKISLSPVY 745 
WD40-rpts                               

1 WD40-repeats found in QUERY=ZK973.1 (Len=745):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   390-465      3.01  238.93  0.03688       12.5%     27.38

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  390-465    ERKDIVFAIGNGTNTYNTQIAVSDMINSNVFPKEINVSYCIVPEHGASKYSCTPSAIEEFGENAEITEISAVSIGR

   WD40 Template    TGECLRTLSGHTS----------------------GVTSVSFSPDGKRLVSGS--------EDGT------IKVWD