Input parameters:

  Query = ZC513.12 (Len=119)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ZC513.12, Len=119):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSQKSKKSIGDVVVTSKLVFPVAEFRTKWERLWPKDEMGTTVTNQESFVKSRVQRYSVDDSKQISKQVGYMNTVNTARVY 80  
WD40-rpts      (______________________________________WD 1_____________________________________

Query       81 SDGDKTWCWVVHSKLGPHAKTSTGKVYTSMCFIQPSANE 119 
WD40-rpts      )                                      

1 WD40-repeats found in QUERY=ZC513.12 (Len=119):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-81       3.04  240.13  0.03556       15.0%     26.01

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-81     MSQKSKKSIGDVVVTSKLVFPVAEFRTKWERLWPKDEMGTTVTNQESFVKSRVQRYSVDDSKQISKQVGYMNTVNTARVYS

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPD---------------GKRLVS------------GSED--------------GTIKVWD