Input parameters:

  Query = YHR182C-A (Len=157)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (YHR182C-A, Len=157):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MWPSFFRTTWHQRWTVTGTFLTTGDTRTNEKNTLLLQFFVTSIRIWEVRVTTIDDNITLFQKWDDLVDQSVNWSTSFNQK 80  
WD40-rpts      (____________________________________WD 1____________________________________)  

Query       81 HDLSRSLQFGDEIFNGSSTDDRFALSFIGQEMVDLGLSSVVSTNSETVVSSVQDQILTHDGQTNQTEISRHFIVVFV 157 
WD40-rpts                                                                                   

1 WD40-repeats found in QUERY=YHR182C-A (Len=157):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-78       2.88  233.45  0.04357       10.0%     18.84

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-78     MWPSFFRTTWHQRWTVTGTFLTTGDTRTNEKNTLLLQFFVTSIRIWEVRVTTIDDNITLFQKWDDLVDQSVNWSTSFN

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLV----------------------SGSEDG----------------TIKVWD