Input parameters:

  Query = YHL050C (Len=697)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (YHL050C, Len=697):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADTPSVAVQAPPGYGKTELFHLPLIALASKGDVEYVSFLFVPYTVLLANCMIRLGRCGCLNVAPVRNFIEEGCDGVTDL 80  
WD40-rpts                            (_____________________________WD 1________________________

Query       81 YVGIYDDLASTNFTDRIAAWENIVECTFRTNNVKLGYLIVDELHNFETEVYRQSQFGGITNLDFDAFEKAIFLSGTAPEA 160 
WD40-rpts      _____)                                                                          

Query      161 VADAALQRIGLTGLAKKSMDINELKRSEDLSRGLSSYPTRMFNLIKEKSKVPLGTNATTTASTNVRTSATTTASINVRTS 240 
WD40-rpts                                                                                      

Query      241 ATTTASINVRTSATTTESTNSNTNATTTESTNSSTNATTTASTNSSTNATTTESTNASAKEDANKDGNAEDNRFHPVTDI 320 
WD40-rpts                                                                                      

Query      321 NKEPYKRKGSQMVLLERKKLKAQFPNTSENMNVLQFLGFRSDEIKHLFLYGIDIYFCPEGVFTQYGLCKGCQKMFELCVC 400 
WD40-rpts                                                                                      

Query      401 WAGQKVSYRRMAWEALAVERMLRNDEEYKEYLEDIEPYHGDPVGYLKFFSVKRREIYSQIQRNYAWYLAITRRRETISVL 480 
WD40-rpts                                                                                      

Query      481 DSTRGKQGSQVFRMSGRQIKELYYKVWSNLRESKTEVLQYFLNWDEKKCQEEWEAKDDTVFVEALEKVGVFQRLRSMTSA 560 
WD40-rpts                                                                                      

Query      561 GLQGPQYVKLQFSRHHRQLRSRYELSLGMHLRDQLALGVTPSKVPHWTAFLSMLIGLFYNKTFRQKLEYLLEQISEVWLL 640 
WD40-rpts                                                                                      

Query      641 PHWLDLANVEVLAADNTRVPLYMLMVAVHKELDSDDVPDGRFDIILLCRDSSREVGE 697 
WD40-rpts                                                               

1 WD40-repeats found in QUERY=YHL050C (Len=697):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    23-86       3.08  241.69  0.03391       17.5%     26.33

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   23-86     LPLIALASKGDVEYVSFLFVPYTVLLANCMIRLGRCGCLNVAPVRNFIEEGCDGVTDLYVGIYD

   WD40 Template    TGECLRTLSGHTSGVTSVSFS-------------PDGKRLVS-----------GSEDGTIKVWD