Input parameters:

  Query = Y71G12B.32 (Len=230)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (Y71G12B.32, Len=230):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPKAKRFAVYESIHDDVANISIVFDEDIIYLTSTAGGPVTIQRAGNVVSRHENDIHHVASELCGEFFENGRLNAETIELD 80  
WD40-rpts                                                                                      

Query       81 KTSIPIPKSLLKIHCNKFLATFLGGQRAIAWLELIEGHVEVLNICETYDVIGLGNLEQISRVGKQLILCSSDVTDENLQN 160 
WD40-rpts                                         (_______________________________________WD 1_

Query      161 LSSKLETLVLNSPTITENGVKILLPNWLEQYSKTGNVFEIRFKASSTNFEKMEMFENLKNAEITWQREYE 230 
WD40-rpts      ______________________________________)                               

1 WD40-repeats found in QUERY=Y71G12B.32 (Len=230):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   116-199      3.21  247.33  0.02854       25.0%     27.97

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  116-199    EGHVEVLNICETYDVIGLGNLEQISRVGKQLILCSSDVTDENLQNLSSKLETLVLNSPTITENGVKILLPNWLEQYSKTGNVFE

   WD40 Template    TGECLRTLSGHTSGVTSVSF--------------SPDGK------R------LVSGSEDGTI------------------KVWD