Input parameters:

  Query = Y71F9AR.3 (Len=746)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (Y71F9AR.3, Len=746):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKLEDSCAQRNLVLNLLHREIGTQYRKYGSIRNTYRHPYQLIAAVLPDLSAGHSMDRYDPTASPSFSTYAKCLGFSPDGK 80  
WD40-rpts                                                                                      

Query       81 YMAFHSHARSAISVLRYSGLENFVKDNVDLRTFFKKIDTFQLKRFVRTLNCRLNRVLGSWWTDDSSILIVQLSLNKIYDE 160 
WD40-rpts                                                                                      

Query      161 DSDQNESDEEQLPQAYDIVNHDADFFANELPSTPSEREASPPSSSQFSNSAAPNLPETKQPPTTTDQYSETSRTIPFYLA 240 
WD40-rpts                                                                                      

Query      241 MESAATISLDGERVAGETSRTMPVYHSLTASIIDGERDGWEVDPSIPSTSNWCPPREEEEPREKRQKIGEDSSFSDFDSL 320 
WD40-rpts                                                                                      

Query      321 FDQLTENLSHNKSQENRSPAMRSLIENLRNNPRISSRQGSPITNASGLGYSAPGSILRRSRASAIPVLPNFHDDSADEEE 400 
WD40-rpts                                                                                      

Query      401 EENSERSDTVMGFLAFDVKTSTTTPLILRNLNNNFKCHMRNRRLTVCCNENLIETYQLTKSNGKNEWEKIGQTRLPNLNS 480 
WD40-rpts                                                                                      

Query      481 FPIDLHYRCGTAVGMSSRMEEVEQGQIFTDVFNFHRFHSPIQQDILTILHRDAPEHASRLFGKSPKLTQCHMISDDLLAV 560 
WD40-rpts                             (___________________________WD 1_________________________

Query      561 TMTFHKRRSSPLHIGATISILDSSITVYPNYHEYLKLLFTHHLPDLLPRHWTYLNPTPAHEQPWFKNSLINVSNPDELNN 640 
WD40-rpts      _)                                                                              

Query      641 FDRLFEVYHILISNFNNVKSTSNPLTDAFFNAAEAEDFMNMGKSTNHYPRDTSAWNHFHENEEFGATLYYHPIDPVLFLK 720 
WD40-rpts                                                                                      

Query      721 VGSFWLVAHRQADVSDDFIVSKNLEH 746 
WD40-rpts                                

1 WD40-repeats found in QUERY=Y71F9AR.3 (Len=746):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   504-562      2.92  235.11  0.04143       15.0%     21.98

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  504-562    QGQIFTDVFNFHRFHSPIQQDILTILHRDAPEHASRLFGKSPKLTQCHMIS-DDLLAVTM

   WD40 Template    TGECLRTLSGHTSGVT-----------SVS---------FSPDGKRLVSGSEDGTIKVWD