Input parameters:

  Query = Y60A9A.1 (Len=109)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (Y60A9A.1, Len=109):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 METFSEIGAQFVNNQQHTFIQTPETSQVHLESLTGVAVRQTSKIVSPFDFSDSENLPNAQRRLITDTVPCCLNFDNDQDD 80  
WD40-rpts      (___________________________________WD 1___________________________________)    

Query       81 DEEQATCSSTKSSPIEPQIIFKKDKCFYY 109 
WD40-rpts                                   

1 WD40-repeats found in QUERY=Y60A9A.1 (Len=109):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-76       2.91  234.82  0.04180       12.5%     -9.10

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-76     METFSEIGAQFVNNQQHTFIQTPETSQVHLESLTGVAVRQTSKIVSPFDFSDSENLPNAQRRLITDTVPCCLNFDN

   WD40 Template    TG---------------ECLRTLSG---------------HTSGVTSVSFSPDGKR------LVSGSEDGTIKVWD