Input parameters:

  Query = Y51H7C.9 (Len=448)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (Y51H7C.9, Len=448):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLQSTLLRKSIFYSLAHRRHVASVPLKDVFCDPENPKILQFGDISMAHHRIQNGIVRTDCRKSRCLSKLFDMNIYLKMEV 80  
WD40-rpts                                                                                      

Query       81 NQDTGSFKERGARYALQNLPEEKKKAGVYAASAGNHALALSLHGKQLGVEVNVVMPKIAPLMKINRCQDLGANILVQGED 160 
WD40-rpts                              (_____________________________________WD 1______________

Query      161 IAESREIALRMAHDSNGTYINGYDHYDILAGAGTTGIEILEQIQMPDAILVPVGGGGLVAGVATAVKALSPTTEVIGVVS 240 
WD40-rpts      _______________________)                                                        

Query      241 ETCQAIVKSLQAGHPVYTPTRPTLADGLAVPNAGVNAFASMIGKVDRVISVPENDIAVAILRLIENEKVVCEGAGAIGIG 320 
WD40-rpts                                                                                      

Query      321 AILSGKLNHLKGKTVVSILSGGNIDSTSLGRCIERGLAYDHRVIRLSVIIPDKPGGLSKLTGLVGELSGNVRDLYLERAF 400 
WD40-rpts                                                                                      

Query      401 MRNDMSSQRVKMVIEVRGEEHEMQLKQKFQEVYDPSNCQFKNNRLPRL 448 
WD40-rpts                                                      

1 WD40-repeats found in QUERY=Y51H7C.9 (Len=448):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   105-184      3.00  238.44  0.03744       20.0%     13.78

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  105-184    KAGVYAASAGNHALALSLHGKQLGVEVNVVMPKIAPLMKINRCQDLGANILVQGEDIAESREIALRMAHDSNGTYINGYD

   WD40 Template    TGECLRTLSGH--------------TSGVTSVSFSP---------DGKRLVSGSED-----------------GTIKVWD