Input parameters:

  Query = Y23B4A.2 (Len=86)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (Y23B4A.2, Len=86):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLLWIVATLLIFSLPVSTALDYNDFSLQRIARAPHPSSALLVPYPRVGKRSNILNNNSESQNSVQKRLYMARVGKRAFFY 80  
WD40-rpts                      (________________________________WD 1___________________________

Query       81 TPRIGK 86  
WD40-rpts      _____)

1 WD40-repeats found in QUERY=Y23B4A.2 (Len=86):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    17-86       2.89  234.12  0.04270       20.0%     -1.31

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   17-86     STALDYNDFSLQRIARAPHPSSALLVPYPRVGKRSNILNNNSESQNSVQKRLYMARVGKRAFFYTPRIGK

   WD40 Template    GECLRTLS---------GHTSGVTSVSFSPDGKRLVSGSEDG----------------------TIKVWD