Input parameters:

  Query = T26G10.1 (Len=489)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (T26G10.1, Len=489):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSDSSSSDGEDNQKFLGNRKKNLTKKKVVTEEIEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQ 80  
WD40-rpts                                                                                     (

Query       81 GKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALA 160 
WD40-rpts      __________________________________________WD 1__________________________________

Query      161 RRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASL 240 
WD40-rpts      ________)                                                                       

Query      241 RDPARVSVSSRYKTVDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQE 320 
WD40-rpts                                                                                      

Query      321 KRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIEA 400 
WD40-rpts                                                                                      

Query      401 NLGKKLDEYKCVENEVMVLVERTQEATENARIEMKEMDEKKKSGKKRRQNDDFGDTEESGGRFKMGIKSMGGRGGSGGGR 480 
WD40-rpts                                                                                      

Query      481 GGKKKKMSK 489 
WD40-rpts               

1 WD40-repeats found in QUERY=T26G10.1 (Len=489):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    80-169      3.16  244.99  0.03066       20.0%     35.54

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   80-169    QGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVAT

   WD40 Template    TGECLRTLSGHTS-------------------GVTSVSFSPD--------------------GKRLVSGSED-----------GTIKVWD