Input parameters:

  Query = T26A8.1 (Len=708)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (T26A8.1, Len=708):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSFHDDSHILSQLGILDSHERSPKRETTSSVAEKKFVDVKLTASMSDDDEDDDEDLVFDRNNLLSSNKRQNASLIRGRAD 80  
WD40-rpts                                                                                      

Query       81 NQTIRLLILLLLFLIAGLVSSSTTLSVCSVRHEVIACLWTCIGMFCGAWSTKLTSARSNLMLFLLSALLTLLVNLFLAFN 160 
WD40-rpts                                                                                      

Query      161 FAFLFAVRGFFVGATLYGGALIWFAFWRKQLRKFLILLLFFSAGGLLAMTLKTTAFNDATNSLADMSIVSRSIQNTVSRL 240 
WD40-rpts                                                (___________________________________WD

Query      241 KRASDDEKTLLPFVAAVIDNSTQAANVTDDSIVKKPEVATGTVQKLKTKTEINVEKEKEVEEKKKDSESELVQVIDGSTG 320 
WD40-rpts       1__________________________________)                                           

Query      321 NSTGSTVETTPSTSTTTTSSTTSTTTTTTTTTETPSTTVITTTIPSTTSEPEATIDVKTRDSKEDTNGVLPTSSAIETPP 400 
WD40-rpts                                                                                      

Query      401 YPENCPEDSLFLPGTIAASEETSSSFIKTFASFGVVIYIVSYALCCLPCGLRPDAKVKKLESDSVVGLGMRLRIFVATIQ 480 
WD40-rpts                                                                                      

Query      481 TIIGFVQQIKHFHSSAQPSAFTEHIVICVFVMIMSFILVFAGHRVGTIESVISSFLLTAFGELILLFSSTSQFGNITSIC 560 
WD40-rpts                                                                                      

Query      561 GLYALWISLFFVVELFLQVRCTVQLAYFLIAWIVGRAMACLFALEPIFNGLEQTFTFILTICIGVLLFNAIRMLQKSKRL 640 
WD40-rpts                                                                                      

Query      641 KEILDNSSTPIGGSGINSATGEYISLTAQDVLDDDDLLDEDEMDRSSMDLDFELEQLGLEPVGVGSRA 708 
WD40-rpts                                                                          

1 WD40-repeats found in QUERY=T26A8.1 (Len=708):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   203-277      2.79  229.75  0.04875       20.0%     10.03

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  203-277    AGGLLAMTLKTTAFNDATNSLADMSIVSRSIQNTVSRLKRASDDEKTLLPFVAAVIDNSTQAANVTDDSIVKKPE

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDG---------------------KRLV--------------SGSEDGTIKVWD